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ABOUT THIS RECORD

ID: MNEST001014
species: Hordeum vulgare
miRNA family: MIR171
source: miRNEST

Taxonomy by NCBI:
Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGATTGAGCCGTGCCAATATC

miRNA*
TGTTGGCTCGACTCACTCAGA

mismatches: 3
bulges: 0

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pre-miRNA
ATGCTGAAACGGTCACTATGATGTTGGCTCGACTCACTCAGACCACGCCGGAGGGAGCCATCTGCGGCGGCGGTTCTGATTGAGCCGTGCCAATATCTTA
GTGCTCTTTCATGCA


dot-bracket secondary structure
.((((((((.((.(((((.(((((((((.((.((((.(((((((.(((((.(((......))).)))))..)).))))).)))).)).))))))))).))
))))).))))).)))



SIMILARITIES
miRBase hvu-MIR171: 3e-60

PMRD hvv-miR171: 8e-39

microPC miR171: 8e-39
UniProt no hits

RFAM MIR171_1: 0.000000000002
most similar mature miRNAs

Identical with: miR171 from microPC (MNEST046135)

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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