miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



ABOUT THIS RECORD

ID: MNEST001024
species: Hordeum vulgare
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 AGTACTTCCTCCGTCCCAAAA

miRNA*
 TTGAGATGGAGGGAGTAGAAC

mismatches: 4
bulges: 0
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pre-miRNA
 TACCAATCGAGTACTTCCTCCGTCCCAAAATAAGTAACTCAAAAATGACTCAAGAGAAGAGTCATTTGTGAGTTACTTACTTTGAGATGGAGGGAGTAGAA
CACAAT

dot-bracket secondary structure
)..........(((((((((((((.((((.(((((((((((.(((((((((.......))))))))).))))))))))).)))).)))))))))))))...
......


SIMILARITIES
miRBase no hits

PMRD hpr-miR1120: 5.0E-6

microPC miR1439: 2.0E-5		UniProt no hits

RFAM 2MIR1122: 1.0E-10		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
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