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ABOUT THIS RECORD
ID:
MNEST001024
species:
Hordeum vulgare
miRNA family:
MIRf341
source:
miRNEST
Taxonomy by NCBI:
Hordeum vulgare
Hordeum
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AGTACTTCCTCCGTCCCAAAA
miRNA*
TTGAGATGGAGGGAGTAGAAC
mismatches:
4
bulges:
0
View larger
pre-miRNA
ACCAATCG
AGTACTTCCTCCGTCCCAAAA
TAAGTAACTCAAAAATGACTCAAGAGAAGAGTCATTTGTGAGTTACTTACT
TTGAGATGGAGGGAGTAGAA
C
ACAAT
dot-bracket secondary structure
........
..(((((((((((((.((((.
(((((((((((.(((((((((.......))))))))).))))))))))).)
))).)))))))))))))...
.
.....
SIMILARITIES
miRBase
no hits
PMRD
hpr-miR1120
:
0.000005
microPC
miR1439
:
0.00002
UniProt
no hits
RFAM
MIR1122: 0.0000000001
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
degradome data
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