ABOUT THIS RECORDspecies: Hordeum vulgare
miRNA family: MIR1436
source: miRNEST
Taxonomy by NCBI:
Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTATTTTGGGACGGAGGGAGT miRNA* TCCCTCCGTCCCAAAATAAGT mismatches: 0 bulges: 0 |
pre-miRNA
AGGATAAATATACTCCCTCCGTCCCAAAATAAGTGTCTCAAGCTTAATACAATTTTATACTAGAGCTAATACAAAGTTGGACACTTATTTTGGGACGGAG
GGAGTAACAAAGAAA
dot-bracket secondary structure
..........((((((((((((((((((((((((((((..(((((.................)))))(((.....)))))))))))))))))))))))))
)))))).........
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
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AGGATAAATATACTCCCTCCGTCCCAAAATAAGTGTCTCAAGCTTAATACAATTTTATACTAGAGCTAATACAAAGTTGGACACTTATTTTGGGACGGAG
GGAGTAACAAAGAAA
dot-bracket secondary structure
..........((((((((((((((((((((((((((((..(((((.................)))))(((.....)))))))))))))))))))))))))
)))))).........
SIMILARITIES| miRBase osa-MIR1862e: 0.000006 PMRD hpr-miR1120: 0.000000006 microPC miR1439: 2e-33 | UniProt no hits RFAM MIR1122: 4e-35 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
download this record
