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ABOUT THIS RECORD

ID: MNEST001047
species: Hordeum vulgare
miRNA family: MIR1120
source: miRNEST

Taxonomy by NCBI:
Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ACTCCCTCCGTCCCAAAATAA

miRNA*
 ATTTTGGGACGGAGGGAGTAT

mismatches: 0
bulges: 0
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pre-miRNA
 GTCAACTGTGGTTACTGTATATGGTACTCCCTCCGTCCCAAAATAAGTCTCTTAAGCTTAGTATAACTTTGTACTAGCTCTAGTACAAAGTTGATACAGT
TATTTTGGGACGGAGGGAGTAT

dot-bracket secondary structure
....((((((.........))))))(((((((((((((((((((((((.......))...((((((((((((((((....)))))))))))).))))..)
))))))))))))))))))))..


SIMILARITIES
miRBase osa-MIR1862c: 0.000002

PMRD hpr-miR1120: 0.0000001

microPC miR1439: 3e-51		UniProt no hits

RFAM MIR1122: 1e-32		most similar mature miRNAs

Identical with: miR1439 from microPC (MNEST045970)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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