ABOUT THIS RECORDspecies: Hordeum vulgare
miRNA family: MIR1120
source: miRNEST
Taxonomy by NCBI:
Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ACTCCCTCCGTCCCAAAATGT miRNA* ATTTTAGACGGAGGGAGTAG mismatches: 1 bulges: 1 |
pre-miRNA
ATGTGAAGTAACTACTTACTCCCTCCGTCCCAAAATGTAAAAAACGTCTTACATTTTAGACGGAGGGAGTAGTATTTTCCTGGCC
dot-bracket secondary structure
....((((....((((.((((((((((((..(((((((((........))))))))).)))))))))))))))).))))......
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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ATGTGAAGTAACTACTTACTCCCTCCGTCCCAAAATGTAAAAAACGTCTTACATTTTAGACGGAGGGAGTAGTATTTTCCTGGCC
dot-bracket secondary structure
....((((....((((.((((((((((((..(((((((((........))))))))).)))))))))))))))).))))......
SIMILARITIES| miRBase tae-MIR1122: 0.0002 PMRD osa-miRf10569-akr: 0.000004 microPC miR1436: 7e-20 | UniProt no hits RFAM MIR1122: 0.000005 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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