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ABOUT THIS RECORD
ID:
MNEST001085
species:
Hordeum vulgare
miRNA family:
MIRf341
source:
miRNEST
Taxonomy by NCBI:
Hordeum vulgare
Hordeum
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AACTCCCTCCGTTCCTAAATA
miRNA*
TTTAGGAACGGAGGGAGTATGT
mismatches:
0
bulges:
1
View larger
pre-miRNA
CCTAAACTAGC
AACTCCCTCCGTTCCTAAATA
TAAGTCTTTTAAGATATTTTACTAGGAATCTACATATGAAGCAAAATGAATGAATCTACACTCTATAA
GATGTCTATATACATACGTATGTAGTCCACTAATGATACCTCTTTAAAGACTTATA
TTTAGGAACGGAGGGAGTATGT
CGTAATTT
dot-bracket secondary structure
.........((
(((((((((((((((((((((
(((((((((.((((....(((.(((....(((((((((.........((....((((..........)
))).))..........)))))))))....))).)))....)))).)))))))))))
)))))))))))))))))).)))
........
SIMILARITIES
miRBase
tae-MIR1122
:
2e-16
PMRD
tae-miR1122
:
2e-16
microPC
miR1436
:
3e-24
UniProt
no hits
RFAM
MIR1122: 3e-40
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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