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ABOUT THIS RECORD
ID:
MNEST001131
species:
Hordeum vulgare
miRNA family:
MIRf341
source:
miRNEST
Taxonomy by NCBI:
Hordeum vulgare
Hordeum
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CCTTCGTCCCAAAATAAGTGT
miRNA*
ACTTATTTTAAGACGGAGGGA
mismatches:
2
bulges:
0
View larger
pre-miRNA
AGATAGTACTT
CCTTCGTCCCAAAATAAGTGT
CGCTGTTTTAGTACTAAATTTATACTAACTTAATACTAAATTTGGGAC
ACTTATTTTAAGACGGAGGG
A
GTATATGG
dot-bracket secondary structure
.....((((((
((((((((..(((((((((((
(.(((.(((((((.(((.((......)).))).)))))))..))))))
)))))))))..)))))))))
)
))))....
SIMILARITIES
miRBase
osa-MIR812j
:
0.000001
PMRD
osa-miR812j
:
0.000001
microPC
no hits
UniProt
no hits
RFAM
MIR1122: 7e-52
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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