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ABOUT THIS RECORD
ID:
MNEST001142
species:
Hordeum vulgare
miRNA family:
MIRf341
source:
miRNEST
Taxonomy by NCBI:
Hordeum vulgare
Hordeum
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTACTCCCTCCGTCCTAAAAT
miRNA*
TTTAACACGGAAGGAGTATAA
mismatches:
4
bulges:
0
View larger
pre-miRNA
CACACTAACTA
TTACTCCCTCCGTCCTAAAAT
AAGTGTCTAAAGCTTAATATAACTTTATACTAAAACTAGTATAACGTTGAGACACTTAT
TTTAACACG
GAAGGAGTATAA
TCCTCATT
dot-bracket secondary structure
...........
.((((((.(((((..((((((
((((((((...........((((.((((((((....)))))))).))))))))))))))
))))..)))
)).))))))...
........
SIMILARITIES
miRBase
far-MIR1122
:
0.0004
PMRD
osa-miRf10381-akr
:
0.00009
microPC
miR1439
:
1e-16
UniProt
no hits
RFAM
MIR1122: 3e-20
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
degradome data
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