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ABOUT THIS RECORD
ID:
MNEST001162
species:
Hordeum vulgare
miRNA family:
MIR1120
source:
miRNEST
Taxonomy by NCBI:
Hordeum vulgare
Hordeum
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CTCTGTAAACAAATATAAGAG
miRNA*
CTTATATTAATTTACAGAGGA
mismatches:
2
bulges:
0
View larger
pre-miRNA
ATCAGTTTAATAAGCTACTCC
CTCTGTAAACAAATATAAGAG
CATTTAGATTACTAAAATAATGATTAAACGCT
CTTATATTAATTTACAGAGGA
AGTAG
CTAGTAGTATTCT
dot-bracket secondary structure
.........((.(((((((.(
(((((((((..((((((((((
(.(((((((((......))))..))))).)))
))))))))..)))))))))).
)))))
)).))........
SIMILARITIES
miRBase
tae-MIR1121
:
0.000000001
PMRD
tmo-miR1120
:
0.000000000001
microPC
no hits
UniProt
no hits
RFAM
MIR1122: 8e-21
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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