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ABOUT THIS RECORD

ID: MNEST001186
species: Hordeum vulgare
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ATACTCCCTTCGTCCGAAAAT

miRNA*
 TTCCGGACGGAGGAAGTATAT

mismatches: 2
bulges: 0
View larger
pre-miRNA
 TTCGCCATGTTATACTCCCTTCGTCCGAAAATACTTGTCCTAGAAATGAACATAATGAATGTATATATAACTAAAATAAATCTAGATACATTCATCTCTA
AAACAAGTATTTCCGGATGGAGGAAGGACAAGTATTTCCGGACGGAGGAAGTATATGATATACA

dot-bracket secondary structure
..........((((((.((((((((((.(((((((((((((...((((......((((((((((.....................)))))))))).....
.......))))(((.......)))))))))))))))).)))))))))).)))))).........


SIMILARITIES
miRBase tae-MIR1128: 0.000002

PMRD tae-miR1128: 0.000000009

microPC miR1133: 1e-23		UniProt no hits

RFAM MIR1122: 5e-29		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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