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ABOUT THIS RECORD

ID: MNEST001201
species: Hordeum vulgare
miRNA family: MIR1439
source: miRNEST

Taxonomy by NCBI:
Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTTTGGAACAGAGTGAGTACA

miRNA*
 TACTCCCTCCATTCCAAAATA

mismatches: 5
bulges: 0
View larger
pre-miRNA
 AGCATATTACTCCCTCCATTCCAAAATATAAGGCTTATTAGTTATCTGAAAAGTCAAGCTTCTATATGTTTGACCAAGTTCATAGAGAAATTTATCAATA
TCTACATACCAAATCATTATCATTAAGATTCACTCTTGAAATATATTTTCATGTTTTATTTATTTTATATTTTAGAAGATATGTATATATTTTAAATATA
AATCTGGTCAAACATAGAGAAGTATGACTTCTGAAAAAATTAATACACCTTATGTTTTGGAACAGAGTGAGTACATAGT

dot-bracket secondary structure
.......(((((.(((..(((((((((((((((..((((((((.((.((..(((((.((((((.((((((((((((.(((.(((..(((.((((......
.......................)))).)))....(((((((((((...((((((((..................)))))))).))))))))))).))).
))).)))))))))))).)))))).))))))).))...))))))))..)))))))))))))))..))).)))))......


SIMILARITIES
miRBase far-MIR437: 0.0000002

PMRD bdi-miR2504b: 0.0002

microPC miR1118: 0.0009		UniProt no hits

RFAM MIR1122: 0.000001		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
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