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ABOUT THIS RECORD

ID: MNEST001218
species: Hordeum vulgare
miRNA family: MIR1439
source: miRNEST

Taxonomy by NCBI:
Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTTTGGGACGGAGGGAGTATG

miRNA*
 TAGCTTCCCTCCGTCCCAAAATT

mismatches: 0
bulges: 2
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pre-miRNA
 TTCTGCATTTTCCTTCCATGAGTATATGTTCATAGCTTCCCTCCGTCCCAAAATTCTTGTCTTAAGTTTGTCCAAAAATAGATGTATCTAAATACTAAAA
CGTGACTAGATACATTCATATCTAGACAAATCTAAGACAAGAATTTTTGGGACGGAGGGAGTATGTATCAAATGTTCTTTGGGGCAATAACAGA

dot-bracket secondary structure
.((((.(((.((((.....((((((.((..((((..((((((((((((((((((((((((((((.(((((((.....((.((((((((((..(((.....
.)))..)))))))))).)).....))))))).))))))))))).)))))))))))))))))))))...)).))))))...)))).)))..))))


SIMILARITIES
miRBase tae-MIR1122: 8e-25

PMRD tae-miR1122: 8e-25

microPC miR1122: 0.00001		UniProt no hits

RFAM MIR1122: 3e-49		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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