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ABOUT THIS RECORD

ID: MNEST001222
species: Hordeum vulgare
miRNA family: MIR2033
source: miRNEST

Taxonomy by NCBI:
Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TATTTCTTTACAGAGGGAGTA

miRNA*
 CTCCCTCCGTAACAAATATA

mismatches: 2
bulges: 1
View larger
pre-miRNA
 GCAATCCTATGTACTCCCTCCGTAACAAATATAAGAGCGTTTAGATAACTAAAGTAATGATCTAAACACTCTTATATTTCTTTACAGAGGGAGTACAATA
TATAG

dot-bracket secondary structure
.........(((((((((((.((((.(((((((((((.((((((((.............)))))))).)))))))))))..)))).)))))))))))...
.....


SIMILARITIES
miRBase tae-MIR1121: 6e-21

PMRD tae-miR1121: 6e-21

microPC miR1121: 0.00000000009		UniProt no hits

RFAM MIR1122: 7e-21		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
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