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ABOUT THIS RECORD
ID:
MNEST001234
species:
Hordeum vulgare
miRNA family:
MIR1436
source:
miRNEST
Taxonomy by NCBI:
Hordeum vulgare
Hordeum
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTATTTTGGGACGGAGGGAGT
miRNA*
TCCCTCCCGTGCCCAAAATAAGT
mismatches:
0
bulges:
2
View larger
pre-miRNA
GTTTATTGTATAC
TCCCTCCCGTGCCCAAAATAAGT
GAGTCAC
TTATTTTGGGACGGAGGGAGT
ATTAGATTGT
dot-bracket secondary structure
....(((..((((
(((((((.((.((((((((((((
(...)))
)))))))))))))))))))))
))..)))...
SIMILARITIES
miRBase
osa-MIR1862e
:
0.000003
PMRD
hpr-miR1120
:
0.00000000006
microPC
miR1439
:
4e-27
UniProt
no hits
RFAM
MIR1122: 0.000000001
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
degradome data
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