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ABOUT THIS RECORD

ID: MNEST001237
species: Hordeum vulgare
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TATAGTACTCCCTCCGTCCGG

miRNA*
 GAACAGAGGGAGTATTACAAA

mismatches: 5
bulges: 0
View larger
pre-miRNA
 GTCGATGCTTATATAGTACTCCCTCCGTCCGGAAATACTTGTTCTAGAAATGTTTGTTCTAGAAATGTACAAAATGGACGTATCTCCATAACTAAAATAA
ATCTAGATACATCTATTTCTAGGACAAGTATTTATGAACAGAGGGAGTATTACAAAAGGACTTG

dot-bracket secondary structure
.............((((((((((((.((.((.((((((((((((((((((((..(((((((((..........(((((......)))))...........
.)))))).)))..)))))))))))))))))))).)).)).))))))))))))............


SIMILARITIES
miRBase tae-MIR1135: 0.000000009

PMRD tae-miR1135: 0.000000009

microPC miR1133: 0.000000000002		UniProt no hits

RFAM MIR1122: 6e-75		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
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