ABOUT THIS RECORDspecies: Hordeum vulgare subsp. spontaneum
miRNA family: MIRf341
source: miRNEST
Taxonomy by NCBI:
Hordeum vulgare subsp. spontaneum Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TACTCCCTCCGTCCCATAATA miRNA* TTATGGGACGGAGGGAGTACC mismatches: 0 bulges: 0 |
pre-miRNA
AACTAGATACTCCCTCCGTCCCATAATATGTGAGTATATTGGATGTAATAACGCCTTATATTATGGGACGGAGGGAGTACCTGCA
dot-bracket secondary structure
...(((.(((((((((((((((((((((((...((.(((((....)))))))....))))))))))))))))))))))).)))..
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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AACTAGATACTCCCTCCGTCCCATAATATGTGAGTATATTGGATGTAATAACGCCTTATATTATGGGACGGAGGGAGTACCTGCA
dot-bracket secondary structure
...(((.(((((((((((((((((((((((...((.(((((....)))))))....))))))))))))))))))))))).)))..
SIMILARITIES| miRBase tae-MIR1120: 0.0000000003 PMRD tae-miR1120: 0.0000000003 microPC miR1436: 0.000001 | UniProt no hits RFAM MIR1122: 0.000000000001 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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