miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



ABOUT THIS RECORD

ID: MNEST001261
species: Hordeum vulgare subsp. spontaneum
miRNA family: MIR1436
source: miRNEST

Taxonomy by NCBI:
Hordeum vulgare subsp. spontaneum Hordeum vulgare Hordeum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTATTTTGGGACGGAGGGAGT

miRNA*
 TCCCTCCGTCTTAAAATAATT

mismatches: 0
bulges: 0
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pre-miRNA
 ATTAGNATGGTCATGTACATATTACATGGTACTCCCTCCGTCTTAAAATAATTGTCTCAACTTTGTACTAGCTTTAGTATAAAATTGTACTAAGGTTAAG
ACACTTATTTTGGGACGGAGGGAGTACATATAAGGCTCAACCAGNATTAATTTA

dot-bracket secondary structure
...........((((((.....))))))(((((((((((((((((((((((.(((((...........(((((((((((((....)))))))))))))))
))).)))))))))))))))))))))))......((.....))............


SIMILARITIES
miRBase osa-MIR1862c: 0.000008

PMRD hpr-miR1120: 0.00000003

microPC miR1439: 1e-35		UniProt no hits

RFAM MIR1122: 3e-30		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
Source sequences
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