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ABOUT THIS RECORD

ID: MNEST001268
species: Humulus lupulus
miRNA family: MIR159
source: miRNEST

Taxonomy by NCBI:
Humulus lupulus Humulus Cannabaceae Rosales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CTTGGATTGAAGGGAGCTCCT

miRNA*
 GGAGCTCCTTTCGGTTCAAACT

mismatches: 1
bulges: 1
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pre-miRNA
 TTCTTTCTTTGGTGTTTTTTACATGGAGCTCCTTTCGGTTCAAACTAAGGGAAGGAGTGAAAGGTACTGACACGGCTGCTGGTTCATGGATTCCTCTGAGC
TGCGCAGGATAAGTCACGCTGGTGCGCAGCTTAAGGGTTTGCATGACTCAGGAGACGTGTTTGCCTTCTCCATTAAACCTTACTTGGATTGAAGGGAGCT
CCTGTAATACCATTCTTACCCCT

dot-bracket secondary structure
)........((((((....((((.(((((((((((((((((((..(((((.((((((...((((((..((((((.((.((((.(((((....(((.(((((
((((((.....(((...)))..))))))))))).)))....))))).)))).)).)))))))))))))))).))...))))).)))))))))))))))))
))))))))))))...........


SIMILARITIES
miRBase ptc-MIR159d: 3.0E-6

PMRD ptc-miR159d: 3.0E-6

microPC miR319: 0.0002		UniProt no hits

RFAM 9MIR159: 6.0E-14		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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