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ABOUT THIS RECORD

ID: MNEST001268
species: Humulus lupulus
miRNA family: MIR159
source: miRNEST

Taxonomy by NCBI:
Humulus lupulus Humulus Cannabaceae Rosales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CTTGGATTGAAGGGAGCTCCT

miRNA*
 GGAGCTCCTTTCGGTTCAAACT

mismatches: 1
bulges: 1
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pre-miRNA
 TCTTTCTTTGGTGTTTTTTACATGGAGCTCCTTTCGGTTCAAACTAAGGGAAGGAGTGAAAGGTACTGACACGGCTGCTGGTTCATGGATTCCTCTGAGC
TGCGCAGGATAAGTCACGCTGGTGCGCAGCTTAAGGGTTTGCATGACTCAGGAGACGTGTTTGCCTTCTCCATTAAACCTTACTTGGATTGAAGGGAGCT
CCTGTAATACCATTCTTACCCCT

dot-bracket secondary structure
........((((((....((((.(((((((((((((((((((..(((((.((((((...((((((..((((((.((.((((.(((((....(((.(((((
((((((.....(((...)))..))))))))))).)))....))))).)))).)).)))))))))))))))).))...))))).)))))))))))))))))
))))))))))))...........


SIMILARITIES
miRBase ptc-MIR159d: 0.000003

PMRD ptc-miR159d: 0.000003

microPC miR319: 0.0002		UniProt no hits

RFAM MIR159: 0.00000000000006		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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