ABOUT THIS RECORDspecies: Humulus lupulus
miRNA family: MIR414
source: miRNEST
Taxonomy by NCBI:
Humulus lupulus Humulus Cannabaceae Rosales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GGATCATCATCATCATCTTCT miRNA* TTATGGCTGTGATGATGCT mismatches: 5 bulges: 1 |
pre-miRNA
GGGGATCATCATCATCATCTTCTTCTTCTTCTTCTTCTTCTCTTTTATTTTCTTCTTCCATCTTGTTTTTGCAGGAACCTTGCCACAAAATTTGAAGCTA
GAGATGGAGGTGAGAACCTAGGTTGAGTTATGGCTGTGATGATGCT
dot-bracket secondary structure
.((.((((((((..((((...(((..(((..(((((..(((((.....(((((.((((.((.((((....(((((...))))).)))).))..))))..)
)))).))))).)))))...)))..)))..))))..)))))))).))
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
GGGGATCATCATCATCATCTTCTTCTTCTTCTTCTTCTTCTCTTTTATTTTCTTCTTCCATCTTGTTTTTGCAGGAACCTTGCCACAAAATTTGAAGCTA
GAGATGGAGGTGAGAACCTAGGTTGAGTTATGGCTGTGATGATGCT
dot-bracket secondary structure
.((.((((((((..((((...(((..(((..(((((..(((((.....(((((.((((.((.((((....(((((...))))).)))).))..))))..)
)))).))))).)))))...)))..)))..))))..)))))))).))
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
