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ABOUT THIS RECORD

ID: MNEST001282
species: Jatropha curcas
miRNA family: MIR167
source: miRNEST

Taxonomy by NCBI:
Jatropha curcas Jatropha Jatropheae Crotonoideae Euphorbiaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGAAGCTGCCAGCATGATCTT

miRNA*
 GATCATGTGGCAGCTTCACC

mismatches: 1
bulges: 1
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pre-miRNA
 GACACTATCAGTTGAAGCTGCCAGCATGATCTTAACCTTCCTCCATAGTTGAGGAAAGATCAGATCATGTGGCAGCTTCACCCGTTGTGG

dot-bracket secondary structure
).(((.......(((((((((((.((((((((.....((((((.......)))))).....)))))))))))))))))))......))).


SIMILARITIES
miRBase ptc-MIR167g: 8.0E-26

PMRD ptc-miR167g: 8.0E-26

microPC miR167: 2.0E-14		UniProt no hits

RFAM 1MIR167_1: 4.0E-28		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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