ABOUT THIS RECORDspecies: Jatropha curcas
miRNA family: MIR167
source: miRNEST
Taxonomy by NCBI:
Jatropha curcas Jatropha Jatropheae Crotonoideae Euphorbiaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AGATCATGTGGCAGCTTCACC miRNA* TGAAGCTGCCAGCATGATCTTA mismatches: 2 bulges: 1 |
pre-miRNA
TAACACTATCAGTTGAAGCTGCCAGCATGATCTTAACCTTCCTCCATAGTTGAGGAAAGATCAGATCATGTGGCAGCTTCACCCGTTGTGGT
dot-bracket secondary structure
)..(((.......(((((((((((.((((((((.....((((((.......)))))).....)))))))))))))))))))......)))..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
TAACACTATCAGTTGAAGCTGCCAGCATGATCTTAACCTTCCTCCATAGTTGAGGAAAGATCAGATCATGTGGCAGCTTCACCCGTTGTGGT
dot-bracket secondary structure
)..(((.......(((((((((((.((((((((.....((((((.......)))))).....)))))))))))))))))))......)))..
SIMILARITIES| miRBase ptc-MIR167g: 9.0E-26 PMRD ptc-miR167g: 9.0E-26 microPC miR167: 2.0E-14 | UniProt no hits RFAM 1MIR167_1: 4.0E-28 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
