miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

ABOUT THIS RECORD

ID: MNEST001300
species: Lactuca perennis
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Lactuca perennis Lactuca Lactucinae Cichorieae Cichorioideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms

SEQUENCE & STRUCTURE

miRNA
TCATCATCATCATCATCATGG

miRNA*
GCGTGATGAATGTGAAGATTATG

mismatches: 4
bulges: 2

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pre-miRNA
AAACTATAATATCATCATCATCATCATCATGGGTTCCGTATGTTGCTGCTTGCGTGATGAATGTGAAGATTATGTTAATCCC

dot-bracket secondary structure
......((((((.(((.((((..(((((((((((...((.....)).)))..))))))))..)))).))).)))))).....

SIMILARITIES

miRBase no hits

PMRD no hits

microPC no hits

UniProt no hits

RFAM no hits

most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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