ABOUT THIS RECORDspecies: Lactuca virosa
miRNA family: MIR419
source: miRNEST
Taxonomy by NCBI:
Lactuca virosa Lactuca Lactucinae Cichorieae Cichorioideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTATGAATGCTGAAGATGTGA miRNA* ATATCAAGGGCAGACATGGCA mismatches: 5 bulges: 0 |
pre-miRNA
TTTATGCGGTGGTATGTATGTTATGAATGCTGAAGATGTGATGATTATATCAAGGGCAGACATGGCATTTGATGCGGGTGATTA
dot-bracket secondary structure
....((((....((...((((((((..((((...(((((((...)))))))...))))..)))))))).)).))))........
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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TTTATGCGGTGGTATGTATGTTATGAATGCTGAAGATGTGATGATTATATCAAGGGCAGACATGGCATTTGATGCGGGTGATTA
dot-bracket secondary structure
....((((....((...((((((((..((((...(((((((...)))))))...))))..)))))))).)).))))........
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
