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ABOUT THIS RECORD
ID:
MNEST001363
species:
Leymus cinereus x Leymus triticoides
miRNA family:
miR1044-3p
source:
miRNEST
Taxonomy by NCBI:
Leymus cinereus x Leymus triticoides
Leymus
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ATGTAGTGCATATTTGATTTT
miRNA*
AACCAAATATGCACCACATTG
mismatches:
2
bulges:
0
View larger
pre-miRNA
AGAGCTGTTTATATACTACTTGTTACTCCCTCTGTTCCACA
ATGTAGTGCATATTTGATTTT
TAATAAGTCAAACAAGTCTACGTTTGAGCAAGATTGTA
GGGAAAATATCAACATCTAAAATCCAAAACTAGTATCATTAGATTCATCATGAAGTCTATTTTCATATTTTAAATATTTACTCCCTCTGTCTCATAATAT
AAGACGTTTTTAGTAGTATTTTAGATGCTGATAGTTTATTCTATAAACTTGGTCAAACGTAGACATGTTTGACTTTCTAAA
AACCAAATATGCACCACAT
TG
TGAAATGGAGGGAGTATGAAGTACCGAAACCTTTTCCT
dot-bracket secondary structure
................(((((..(((((((((((((.((((
((((.(((((((((((.((((
((..((((((((((.((((((((((((.((((.(((((
((.(((.(((((.((((((((((...(((.(((..((((..........))))...))).))).(((((...)))))(((((.....(((((.((...))
.))))).....))))).)))))))))).))))).)))..))))))).)))).)))))))))))).))))))))))..))))
)).))))))))))).))))
))
)).)))))))))))))..)))))..((((...))))..
SIMILARITIES
miRBase
tae-MIR1130
:
0.00007
PMRD
tae-miR1130
:
0.00007
microPC
no hits
UniProt
no hits
RFAM
MIR1122: 0.00000002
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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