miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



ABOUT THIS RECORD

ID: MNEST001374
species: Leymus cinereus x Leymus triticoides
miRNA family: MIRf34
source: miRNEST

Taxonomy by NCBI:
Leymus cinereus x Leymus triticoides Leymus Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TATGGGACGGAGGGAGTACAT

miRNA*
 GTACTCCCTCCGTCCGATAGC

mismatches: 3
bulges: 0
View larger
pre-miRNA
 AAGCACTGCTAACATTCTGCTGGAAAGTTTGGTCGCTGTGGGGTACTCCCTCCGTCCGATAGCTTGCAAAAACGTTCTTATATTATGGGACGGAGGGAGT
ACATTTTACAATGTACAAGGAGTCATGCGTGTTCTGCCAGTTC

dot-bracket secondary structure
....(((((.((((...(((..((...((((..((.(((((.(((((((((((((((.((((...((......)).......)))).)))))))))))))
))...))))).))..))))...))..)))))))..).))))..


SIMILARITIES
miRBase tae-MIR1120: 0.00000000003

PMRD tae-miR1120: 0.00000000003

microPC miR1436: 0.000000002		UniProt no hits

RFAM MIR1122: 0.00000000003		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




Liczniki na strone;