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ABOUT THIS RECORD
ID:
MNEST001377
species:
Leymus cinereus x Leymus triticoides
miRNA family:
MIR1127
source:
miRNEST
Taxonomy by NCBI:
Leymus cinereus x Leymus triticoides
Leymus
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AACTACTCCCTCCGTCCGGAA
miRNA*
TCGGACGGAGGGAGTACTACA
mismatches:
3
bulges:
0
View larger
pre-miRNA
TTGTACACCTA
AACTACTCCCTCCGTCCGGAA
ATACTTGTCGGAGGAATGGATGTATCTAGATGTATTTTAGTTCTAGATACATCCATTTTTATCCATTT
CTCTGACAAGTATTT
TCGGACGGAGGGAGTACTACA
CATGTTGT
dot-bracket secondary structure
...........
...((((((((((((((((((
((((((((((((((((((((((......(((((((((.......)))))))))......)))))))))
)))))))))))))))
))))))))))))))))..(((
.....)))
SIMILARITIES
miRBase
tae-MIR1128
:
9e-24
PMRD
ata-miR1122
:
4e-38
microPC
miR1128
:
3e-39
UniProt
no hits
RFAM
MIR1122: 9e-49
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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