ABOUT THIS RECORDspecies: Leymus cinereus x Leymus triticoides
miRNA family: MIR2033
source: miRNEST
Taxonomy by NCBI:
Leymus cinereus x Leymus triticoides Leymus Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TATTTCTTTACAGAGGGAGTA miRNA* TACTCCCTCCGTAAAGAAATATA mismatches: 1 bulges: 2 |
pre-miRNA
CTTCAGGTATACTCCCTCCGTAAAGAAATATAAGATCGTTTAGATCACTATCTAAACGCTCTTATATTTCTTTACAGAGGGAGTACTATAT
dot-bracket secondary structure
.....(((..((((((((.((((((((((((((((.(((((((((....))))))))).)))))))))))))))).)))))))))))....
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CTTCAGGTATACTCCCTCCGTAAAGAAATATAAGATCGTTTAGATCACTATCTAAACGCTCTTATATTTCTTTACAGAGGGAGTACTATAT
dot-bracket secondary structure
.....(((..((((((((.((((((((((((((((.(((((((((....))))))))).)))))))))))))))).)))))))))))....
SIMILARITIES| miRBase tae-MIR1121: 2e-17 PMRD ave-miR1120: 2e-26 microPC no hits | UniProt no hits RFAM MIR1122: 4e-25 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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