ABOUT THIS RECORDspecies: Leymus cinereus x Leymus triticoides
miRNA family: MIRf341
source: miRNEST
Taxonomy by NCBI:
Leymus cinereus x Leymus triticoides Leymus Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CTCCGTCCCAAAATATAAGAC miRNA* TCAAATTTTGGGACGGAGGT mismatches: 3 bulges: 1 |
pre-miRNA
CGCTAAATTATACTACCTCCGTCCCAAAATATAAGACGTTTTTGCAGTTCAAATTTTGGGACGGAGGTAGTAGTAACAAAT
dot-bracket secondary structure
..........((((((((((((((((((((....(((.........)))...)))))))))))))))))))).........
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CGCTAAATTATACTACCTCCGTCCCAAAATATAAGACGTTTTTGCAGTTCAAATTTTGGGACGGAGGTAGTAGTAACAAAT
dot-bracket secondary structure
..........((((((((((((((((((((....(((.........)))...)))))))))))))))))))).........
SIMILARITIES| miRBase osa-MIR1439: 0.0000009 PMRD osa-miRf10151-akr: 0.0000002 microPC miR1439: 0.000004 | UniProt no hits RFAM MIR1122: 0.00000002 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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