ABOUT THIS RECORDspecies: Liriodendron tulipifera
miRNA family: miR1863
source: miRNEST
Taxonomy by NCBI:
Liriodendron tulipifera Liriodendron Magnoliaceae Magnoliales magnoliids Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGCTCTGATACCATGTCAGAC miRNA* TTAACATGGTATCAGAGCGGA mismatches: 2 bulges: 0 |
pre-miRNA
GAATACTTTGGTGCTCTGATACCATGTCAGACAACCACTTTATCTAAAAGCTTGAGCTTTTAGATCAAGTGGTGATTTAACATGGTATCAGAGCGGAAGG
TCTTG
dot-bracket secondary structure
.((.(((((..((((((((((((((((.(((..(((((((.((((((((((....)))))))))).)))))))..))).)))))))))))))))).))))
).)).
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GAATACTTTGGTGCTCTGATACCATGTCAGACAACCACTTTATCTAAAAGCTTGAGCTTTTAGATCAAGTGGTGATTTAACATGGTATCAGAGCGGAAGG
TCTTG
dot-bracket secondary structure
.((.(((((..((((((((((((((((.(((..(((((((.((((((((((....)))))))))).)))))))..))).)))))))))))))))).))))
).)).
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
