miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

ABOUT THIS RECORD

ID: MNEST001411
species: Liriodendron tulipifera
miRNA family: MIR1513
source: miRNEST

Taxonomy by NCBI:
Liriodendron tulipifera Liriodendron Magnoliaceae Magnoliales magnoliids Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms

SEQUENCE & STRUCTURE

miRNA
AGAGAAAAAGCCATGACTTAT

miRNA*
AAGTTATGGTTTATTCATCTCC

mismatches: 3
bulges: 1

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pre-miRNA
TTCTGGATAATAAAGTTATGGTTTATTCATCTCCAAAAGAGAAAAAGCCATGACTTATCACTTGCTC

dot-bracket secondary structure
............((((((((((((.(((.(((.....)))))).))))))))))))...........

SIMILARITIES

miRBase no hits

PMRD no hits

microPC no hits

UniProt no hits

RFAM no hits

most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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