miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

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ABOUT THIS RECORD

ID: MNEST001422
species: Lotus japonicus
miRNA family: MIRf1037
source: miRNEST

Taxonomy by NCBI:
Lotus japonicus Lotus Loteae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTATTGCCACTAAATGTCATT

miRNA*
TGACGTTTAGTGGCGGTAAAA

mismatches: 0
bulges: 0

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pre-miRNA
CACATGTTGCTTTAATAGGGTTAATGATCAAATTAGTCTCTGATTTTGTAAGAAAGTTTGATTTTAGTCATTTGCAGAAAAGTGACGTTTAGTGGCGGTA
AAA
AACAGCCAGTAATTCATAAATTATTGCCACTAAATGTCATTTTCTTGCCGAGAGACTAAAACCAAACTCGCTTACAAAATCAGGGACTAATTTAACA
ATTAACCCGGTTTAATAGTTTAG


dot-bracket secondary structure
....((..(((((((..((((((((....(((((((((((((((((((((((..((((((.((((((((.((.((((.((((((((((((((((((((((
(..
....................))))))))))))))))))))))).)))).))..)))))))).))))))..)))))))))))))))))))))))....
))))))))...)))).))).)).



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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