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ABOUT THIS RECORD

ID: MNEST001435
species: Lotus japonicus
miRNA family: miR168a
source: miRNEST

Taxonomy by NCBI:
Lotus japonicus Lotus Loteae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CCCGCCTTGCATCAACTGAAT

miRNA*
 TCGCTTGGTGCAGGTCGGGAA

mismatches: 2
bulges: 0
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pre-miRNA
 TCTCTCTCGCTTCGCGGTCTCTAATTCGCTTGGTGCAGGTCGGGAACCGCTGCTGCTTCTGCCGTTTTCGCGCGTAATCACTCACCGGAGGAGCGGTTACC
GCCGCCGGTTGGATCGGATCCCGCCTTGCATCAACTGAATCGGAACCCGCCTTGAAGCTTT

dot-bracket secondary structure
).......(((((((((..(((.(((((.((((((((((.(((((.(((......((...((((.....(((.((((((.(((.......))).)))))))
))...)))).))..))).))))).)))))))))).))))).)))..))))...)))))...


SIMILARITIES
miRBase gma-MIR168: 1.0E-13

PMRD gma-miR168: 1.0E-13

microPC miR168: 2.0E-6		UniProt no hits

RFAM 8MIR168: 4.0E-14		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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