miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Back to search results
ABOUT THIS RECORD
ID:
MNEST001451
species:
Lotus japonicus
miRNA family:
MIR2119
source:
miRNEST
Taxonomy by NCBI:
Lotus japonicus
Lotus
Loteae
Papilionoideae
Fabaceae
Fabales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TAAAAGGGAGGTGTGGAGTAG
miRNA*
ACTTCATACCTTCCTTTTGTA
mismatches:
0
bulges:
0
View larger
pre-miRNA
TCAATGGTGTTGTTCCTACACTTTATTTTCTATACTCTT
ACTTCATACCTTCCTTTTGTA
GGAAAATGAAAAGGGAAATAAATTCCTCTTTCTTTTTTAA
A
TAAAAGGGAGGTGTGGAGTAG
AAGTGTGAAAAATAAAAAATACAAGAATAACATGAT
dot-bracket secondary structure
......(((((((((......((((((((.((((((.((
((((((((((((((((((((.
.(((((.((((.(((((.....))))).)))).)))))..
)
)))))))))))))))))))))
.)))))).))))))))........)))))))))...
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record