ABOUT THIS RECORDspecies: Malus domestica
miRNA family: miR162
source: miRNEST
SEQUENCE & STRUCTURE| miRNA TGGAGGCATCGGTTCATCGAT miRNA* CGATAAACCTTTGCATCCAGC mismatches: 4 bulges: 0 |
pre-miRNA
GTGGGAGTGCACTGGAGGCATCGGTTCATCGATCTGTTTATGAGATTTTGTTGTGAGTAAACACAGTTCATGAATCGGTCGATAAACCTTTGCATCCAGC
GCTCACTCT
dot-bracket secondary structure
...(((((((.(((((.(((..((((.(((((((.(((((((((....((((.......))))...))))))))).))))))).))))..))).))))).
))..)))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GTGGGAGTGCACTGGAGGCATCGGTTCATCGATCTGTTTATGAGATTTTGTTGTGAGTAAACACAGTTCATGAATCGGTCGATAAACCTTTGCATCCAGC
GCTCACTCT
dot-bracket secondary structure
...(((((((.(((((.(((..((((.(((((((.(((((((((....((((.......))))...))))))))).))))))).))))..))).))))).
))..)))))
SIMILARITIES| miRBase ghr-MIR162a: 0.00000000000009 PMRD mdo-miR162: 9e-45 microPC miR162: 5e-40 | UniProt no hits RFAM MIR162_2: 0.000000000006 | most similar mature miRNAs |
Identical with: mdo-miR162 from PMRD (MNEST048690) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
