ABOUT THIS RECORDspecies: Malus domestica
miRNA family: MIR414
source: miRNEST
SEQUENCE & STRUCTURE| miRNA TCATCATCATCATCATCATCA miRNA* GTGACGGTGAGATGTGGGC mismatches: 1 bulges: 2 |
pre-miRNA
GAATATGGTGACGGTGAGATGTGGGCATTGTGCCAATCTGCTCTCTGTTAATATTGGAGGTTCCCTTCAGTCGACCACCATTCCTCCTCATCAAGATCCC
CAGAAACAACACCTGAGCTCTGAGGATTCAAATAAGAACTGCGGCTCATCATCATCATCATCATCATCATCATCC
dot-bracket secondary structure
((..(((((((.((((((((((((((...((.((..((.((((..((((....((((.((.((...............................)).)))
)))....))))...))))...)))).(((......)))..)).))))).)))).))))).)))))))..))....
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
degradome data
download this record
GAATATGGTGACGGTGAGATGTGGGCATTGTGCCAATCTGCTCTCTGTTAATATTGGAGGTTCCCTTCAGTCGACCACCATTCCTCCTCATCAAGATCCC
CAGAAACAACACCTGAGCTCTGAGGATTCAAATAAGAACTGCGGCTCATCATCATCATCATCATCATCATCATCC
dot-bracket secondary structure
((..(((((((.((((((((((((((...((.((..((.((((..((((....((((.((.((...............................)).)))
)))....))))...))))...)))).(((......)))..)).))))).)))).))))).)))))))..))....
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt sp|Q9XFB0|YAB2_ARATH: 0.000000009 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
degradome data
download this record
