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ABOUT THIS RECORD

ID: MNEST001501
species: Manihot esculenta
miRNA family: MIRf1173
source: miRNEST

Taxonomy by NCBI:
Manihot esculenta Manihot Manihoteae Crotonoideae Euphorbiaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
ATGTTGAATTTGGGGGCACTT

miRNA*
GTGCTATCTGTTACTTATGT

mismatches: 5
bulges: 1

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pre-miRNA
AGTTGATCCCCTCCATAGTGAAGTGCTATCTGTTACTTATGTCAAAGGCGGAACTGCCATAAATGTAATTCCATCATATGTTGAATTTGGGGGCACTTTG
AGGAGTCTATCGACTGA


dot-bracket secondary structure
(((((((...((((....(((((((((.((.(((...(((((....((.((((.(((.......))).)))).)))))))...)))..)).)))))))))
.))))...)))))))..



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt sp|Q7XUA8|ILL5_ORYSJ: 0.000000006

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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