ABOUT THIS RECORDspecies: Manihot esculenta
miRNA family: MIRf37
source: miRNEST
Taxonomy by NCBI:
Manihot esculenta Manihot Manihoteae Crotonoideae Euphorbiaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ATTCGGTTCGATTCGGTTCGG miRNA* AAACCGAATCGAACCGAACCG mismatches: 4 bulges: 0 |
pre-miRNA
TTGGTCAGAAACCGAATCGAACCGAACCGGTCTGATTCGGTTCGATTCGGTTCGGTTTGATCGG
dot-bracket secondary structure
.(((((((((((((((((((((((((.(.....).)))))))))))))))))...)))))))).
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TTGGTCAGAAACCGAATCGAACCGAACCGGTCTGATTCGGTTCGATTCGGTTCGGTTTGATCGG
dot-bracket secondary structure
.(((((((((((((((((((((((((.(.....).)))))))))))))))))...)))))))).
SIMILARITIES| miRBase no hits PMRD ptc-miRf11864-akr: 0.00001 microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
