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ABOUT THIS RECORD

ID: MNEST001525
species: Manihot esculenta
miRNA family: MIR399
source: miRNEST

Taxonomy by NCBI:
Manihot esculenta Manihot Manihoteae Crotonoideae Euphorbiaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGCCAAAGGAGAATTGCCC

miRNA*
 CGACTCTCCCTTGGCAAA

mismatches: 2
bulges: 1
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pre-miRNA
 GTGCATGGTCGAGGAATGGCAGGCGACTCTCCCTTGGCAAACGGATGATGATCACTATTCACCATGCAAATTAATGCATAATCTGCTTTGCCAAAGGAGA
ATTGCCCTGCCATTTCTAATATCATAC

dot-bracket secondary structure
....(((((..(((((((((((((((.(((((.(((((((((((((..(((.......)))..(((((......))))).))))).)))))))).)))))
.))).))))))))))))...)))))..


SIMILARITIES
miRBase vvi-MIR399h: 0.000000002

PMRD vvi-miR399h: 0.000000002

microPC miR399: 7e-46		UniProt no hits

RFAM mir-399: 0.00000003		most similar mature miRNAs

Identical with: miR399 from microPC (MNEST045711)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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