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ABOUT THIS RECORD

ID: MNEST001528
species: Manihot esculenta
miRNA family: MIR167
source: miRNEST

Taxonomy by NCBI:
Manihot esculenta Manihot Manihoteae Crotonoideae Euphorbiaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGAAGCTGCCAGCATGATCTG

miRNA*
 GGTCATCTTGCAGCTTCAAT

mismatches: 1
bulges: 1
View larger
pre-miRNA
 CTCGTTTAATATTAATGTTGGTTTGAGAGGTTGAAGCTGCCAGCATGATCTGGTAATGATCTAGCCAAAACCTTTCTATACGTAGACCTATATTTATATT
TCTATACACATCAAGATATGGATTATTAAATTTCCAGTTTTCTTTACAAAGTTTTCTGCTATATTCCTTTCAATTAGGCTATCAATTTTTACCAAGGGAA
AGGATTTACGAGTACTGAAAAGTACCCATATATCCTTGTAGCCTAAAAAGAGGAATAGTTCCTGATTGTTCGATCAGGGGTTTTGAGACAAAAGATAAGA
AACCTAGTTGGATAGGATATATGAGTGCTGTGTCTCTGTGTGTGTGTGTGTGTGTGGGGTTCCATCATCAGGTCATCTTGCAGCTTCAATCACTCAATCA
CCAACAATGAAAGAAAAT

dot-bracket secondary structure
...........(((.((((((((((((.((((((((((((.((.((((((((((.(((.((((...................))))(((((((.(((((.
..((((((((...((((((((....(((.((.(((.....(((..((..((.(((((.((.(((((((((...((((((((((..(((.....))).))(
(((((.((...(((((....)))))...)).)))))).))))))))..))))))))).(((((((((....))))))))).((((...))))))...)))
)).)).)).)))..))).)).)))...)))))))).)))))))).))))).)))))))....))).)))))))))))).)))))))))))).)))))..)
)))))).)))........


SIMILARITIES
miRBase vvi-MIR167a: 0.0000000000004

PMRD ppl-miR167b: 0.00000000000002

microPC miR167: 0.00002		UniProt no hits

RFAM MIR167_1: 0.000000000000007		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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