ABOUT THIS RECORDspecies: Medicago sativa
miRNA family: MIRf341
source: miRNEST
Taxonomy by NCBI:
Medicago sativa Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ATACTACCTCCGTCCCTAATT miRNA* TTANGGACNGAGGTAGTATCA mismatches: 3 bulges: 0 |
pre-miRNA
ACGTTAAGAAGATACTACCTCCGTCCCTAATTATAAGACCCTTTTGAGAATTTTTTTTGTCCCTTTTTATAAGACCCCTTTGCTATTTCCAACTACATTA
ATTATTTCTTTACATACATGCCCCTTTTTATTATACATCTTTTTCTTCAATAAGCAATAAATAACATGTTGAAAACATAAACCAACCCTCTCTCTNNNGG
ATAAAATTGTAAAACCAATANTAATTACAAACATATTTAATACAAAATCCNCTATCTTAATTNCNNNTATTTTTNNAANGNTNCNATATTANGGACNGAG
GTAGTATCATGTATGAG
dot-bracket secondary structure
..........(((((((((((.((((.((((...((((.....((((((.....((((((....((.(((.(((....((((...(((.((((....(((
.(((((.(((.........................................))).))))).)))...)))).)))..)))).......))).(((...))
).....((((((............))))))..)))...)).)))))).......)))))).........))))..............)))).)))).)))
)))))))).........
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
Source sequences
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ACGTTAAGAAGATACTACCTCCGTCCCTAATTATAAGACCCTTTTGAGAATTTTTTTTGTCCCTTTTTATAAGACCCCTTTGCTATTTCCAACTACATTA
ATTATTTCTTTACATACATGCCCCTTTTTATTATACATCTTTTTCTTCAATAAGCAATAAATAACATGTTGAAAACATAAACCAACCCTCTCTCTNNNGG
ATAAAATTGTAAAACCAATANTAATTACAAACATATTTAATACAAAATCCNCTATCTTAATTNCNNNTATTTTTNNAANGNTNCNATATTANGGACNGAG
GTAGTATCATGTATGAG
dot-bracket secondary structure
..........(((((((((((.((((.((((...((((.....((((((.....((((((....((.(((.(((....((((...(((.((((....(((
.(((((.(((.........................................))).))))).)))...)))).)))..)))).......))).(((...))
).....((((((............))))))..)))...)).)))))).......)))))).........))))..............)))).)))).)))
)))))))).........
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
Source sequences
download this record
