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ABOUT THIS RECORD

ID: MNEST001551
species: Mesembryanthemum crystallinum
miRNA family: miR396a
source: miRNEST

Taxonomy by NCBI:
Mesembryanthemum crystallinum Mesembryanthemum Aizoaceae Caryophyllales core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GTTCAAGAAAGCTGTGGGAAA

miRNA*
 TTCCACAGCTTTCTTGAACTT

mismatches: 0
bulges: 0
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pre-miRNA
 TCAGGCAGGAACAATTACAAGTCCTGCCATGCTTTTCCACAGCTTTCTTGAACTTTCCGGTTCTTTTCTTCTTTTTTTTTCTTTCTAGTGAGAAACAAACC
ATCATTGGGAAAGTTCAAGAAAGCTGTGGGAAAATATGGCGTTTCCCAGGACTTGGACCGACT

dot-bracket secondary structure
)................((((((((((((((.((((((((((((((((((((((((((((((..((((((...................))))))..))))
.......)))))))))))))))))))))))))).)))))).......))))))))........


SIMILARITIES
miRBase vvi-MIR396b: 2.0E-12

PMRD vvi-miR396b: 2.0E-12

microPC miR396: 2.0E-34		UniProt no hits

RFAM 6MIR396: 3.0E-9		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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