miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

ABOUT THIS RECORD

ID: MNEST001554
species: Mesembryanthemum crystallinum
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Mesembryanthemum crystallinum Mesembryanthemum Aizoaceae Caryophyllales core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms

SEQUENCE & STRUCTURE

miRNA
TCATCATCATCCTCATCTTCT

miRNA*
AAGAGAGACGGTGGTGGTGAGA

mismatches: 2
bulges: 1

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pre-miRNA
CATCATCATCATCATCATCATCCTCATCTTCTAGAAGAAGAGAGACGGTGGTGGTGAGATGCACCCA

dot-bracket secondary structure
......((((.(((((((((((.((.((((((...))))))..)).)))))))))))))))......

SIMILARITIES

miRBase no hits

PMRD no hits

microPC no hits

UniProt no hits

RFAM no hits

most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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