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ABOUT THIS RECORD

ID: MNEST001557
species: Mesembryanthemum crystallinum
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Mesembryanthemum crystallinum Mesembryanthemum Aizoaceae Caryophyllales core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCATCATCATCATCATCATCA

miRNA*
 AGGATGAGTGAAGAGGATGATC

mismatches: 4
bulges: 1
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pre-miRNA
 GGAGGAGGAGGATGAGTGAAGAGGATGATCTGAGCGGAGAGGAGTTTAGGAGGAAGGTGGAGGCGTTTATTGCCAAGCAGAAGGGGTTCCTGAGGCAAGA
GAGTCAGGCTGTAAGTTTGACAAATCAGTCGAATTCTCTGTAAGAGCAAATAAAAAAACAGAGCAAAAGCAGAGTTTTAATCTAATGTTTATTACTTACT
ACATTATTCTGCTTTGCTTTGAATCATCATCATCATCATCATCATCATCAT

dot-bracket secondary structure
.((.((.((.(((((.(((.((.(((((((.((((((((.(((((.....((..(((((.(((((((..(((((...(((.........))).)))))((
..((((((((...))))))))...)).((.(((..((((((....((...............))....)))))).))).))..)))))))..))))).))
.....))))).)))))))).).)))))).)).)))))))).)).)).))..


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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