ABOUT THIS RECORDspecies: Mimulus guttatus
miRNA family: MIR395
source: miRNEST
Taxonomy by NCBI:
Mimulus guttatus Mimulus Phrymaceae Lamiales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGAAGTGTTTGGGGGAACTC miRNA* GTTTCCTCAATCGCTTCATT mismatches: 1 bulges: 0 |
pre-miRNA
ATCATCGAAACAAGTCATCAGGTTTCCCCTGGAGTTTCCTCAATCGCTTCATTGAGTCGGTTTTTTTATTTTTTTAAATAATAAAAATACTCACTGAAGTG
TTTGGGGGAACTCCCGGAGATTTCCTGATACATATATATATA
dot-bracket secondary structure
)............((.((((((..((.((.(((((((((((((.(((((((.(((((...((((.((((((....)))))).))))..))))).)))))))
.))))))))))))).)).))...))))))))...........
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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ATCATCGAAACAAGTCATCAGGTTTCCCCTGGAGTTTCCTCAATCGCTTCATTGAGTCGGTTTTTTTATTTTTTTAAATAATAAAAATACTCACTGAAGTG
TTTGGGGGAACTCCCGGAGATTTCCTGATACATATATATATA
dot-bracket secondary structure
)............((.((((((..((.((.(((((((((((((.(((((((.(((((...((((.((((((....)))))).))))..))))).)))))))
.))))))))))))).)).))...))))))))...........
SIMILARITIES| miRBase ath-MIR395a: 7.0E-9 PMRD ath-miR395a: 7.0E-9 microPC miR395: 0.0001 | UniProt no hits RFAM 5mir-395: 1.0E-7 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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