ABOUT THIS RECORDspecies: Mimulus guttatus var. nasutus
miRNA family: MIR414
source: miRNEST
Taxonomy by NCBI:
Mimulus guttatus var. nasutus Mimulus guttatus subsp. guttatus Mimulus guttatus Mimulus Phrymaceae Lamiales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCATCATCATCATCATCATCA miRNA* GTGATGGTGGTGAAGATGGTG mismatches: 1 bulges: 0 |
pre-miRNA
AACGGATCAAATCATCATCATCATCATCATCATCAGTGCAGGTAGGTAGTAGTCTGGTACTGGTGGTAGCCATTTCCAAAGAAGCTTCCATGATTAGGCG
AAAAGTTATAAGCACCACCACCGAAAAACGAAGGAACTTGATGGTGATGGTGGTGAAGATGGTGGTGGTCGG
dot-bracket secondary structure
....(((((.((((((.((((((((((((((((((((((..((((......(((((((....((((.(((...(((....)))))).)))).))))))).
.....))))..))))..((..((.....))..))....)))))))))))))))))).))))))..)))))..
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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AACGGATCAAATCATCATCATCATCATCATCATCAGTGCAGGTAGGTAGTAGTCTGGTACTGGTGGTAGCCATTTCCAAAGAAGCTTCCATGATTAGGCG
AAAAGTTATAAGCACCACCACCGAAAAACGAAGGAACTTGATGGTGATGGTGGTGAAGATGGTGGTGGTCGG
dot-bracket secondary structure
....(((((.((((((.((((((((((((((((((((((..((((......(((((((....((((.(((...(((....)))))).)))).))))))).
.....))))..))))..((..((.....))..))....)))))))))))))))))).))))))..)))))..
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM mir-598: 0.0002 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
