ABOUT THIS RECORDspecies: Mimulus lewisii
miRNA family: MIR156
source: miRNEST
Taxonomy by NCBI:
Mimulus lewisii Mimulus Phrymaceae Lamiales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGACAGAAGAGAGAGAGCACA miRNA* TGCTCTTCGTCTTCTGTCAAC mismatches: 2 bulges: 0 |
pre-miRNA
CAGGAAATTCGTTGACAGAAGAGAGAGAGCACAGGCTGCCATTGGCAAAGATTGTTTGCTTTTCGCGGGATTGTGCTCTTCGTCTTCTGTCAACGACTAGT
C
dot-bracket secondary structure
).......((((((((((((((..((((((((((.((((....((((((.....))))))....))))..))))))))))..)))))))))))))).....
.
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CAGGAAATTCGTTGACAGAAGAGAGAGAGCACAGGCTGCCATTGGCAAAGATTGTTTGCTTTTCGCGGGATTGTGCTCTTCGTCTTCTGTCAACGACTAGT
C
dot-bracket secondary structure
).......((((((((((((((..((((((((((.((((....((((((.....))))))....))))..))))))))))..)))))))))))))).....
.
SIMILARITIES| miRBase far-MIR156b: 1.0E-6 PMRD sin-miR157: 1.0E-9 microPC miR157: 2.0E-5 | UniProt no hits RFAM 6mir-156: 0.0003 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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