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ABOUT THIS RECORD

ID: MNEST001601
species: Nicotiana benthamiana
miRNA family: MIR166
source: miRNEST

Taxonomy by NCBI:
Nicotiana benthamiana Nicotiana Nicotianeae Nicotianoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCGGACCAGGCTTCATTCC

miRNA*
 AATGTTGTCTGGCTCGAGG

mismatches: 3
bulges: 0
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pre-miRNA
 TTTCTATTGTGGGGAATGTTGTCTGGCTCGAGGAATCTTTAATCTTGATCAAATTCTTTACACAGATCTATCTATTATTATATATGTTGCTTATACATTTT
AGATCTTATATAGATCTATAATTGTTAGTTGTTAGATCTATGAATTTTGATTATATTTTTTTGGGTCGTCGGACCAGGCTTCATTCCCCTCAAAGAT

dot-bracket secondary structure
).(((.(((.((((((((..((((((.((((.((.((...((...((((((((....((.((.(((((((..................(((...(((...(
((((((.....)))))))....))).)))...))))))).)))).))))))))....))...)).)).)))).))))))..)))))))).)))))).


SIMILARITIES
miRBase aqc-MIR166e: 3.0E-9

PMRD aqc-miR166e: 3.0E-9

microPC miR166: 1.0E-85		UniProt no hits

RFAM 6mir-166: 8.0E-7		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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