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ABOUT THIS RECORD
ID:
MNEST001633
species:
Nicotiana tabacum
miRNA family:
miR168a
source:
miRNEST
Taxonomy by NCBI:
Nicotiana tabacum
Nicotiana
Nicotianeae
Nicotianoideae
Solanaceae
Solanales
lamiids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CCCGCCTTGCATCAACTGAAT
miRNA*
TCGCTTGGTGCAGGTCGGGAC
mismatches:
2
bulges:
0
View larger
pre-miRNA
CATTTATCGCGGCGGTCTCTCAT
TCGCTTGGTGCAGGTCGGGAC
CTGCCTCGCCGGCGACAATGACGTCAGCTGACGGTGACGGTGGCGTATCGATAGAT
ATACATGTTGTTTATGACGAAATTTTGGT
CCCGCCTTGCATCAACTGAAT
CGGAGACTGCGGTGAATTTT
dot-bracket secondary structure
......((((.(((((((((.((
(((.((((((((((.((((((
(.((((((((((((((......))).))...)))))).)))...(((((....)))
))..((.(((((...))))).))...)))
)))).)))))))))).)))))
.))))))))).)))).....
SIMILARITIES
miRBase
tcc-MIR168
:
0.000000000009
PMRD
stu-miR168
:
0.00000000000004
microPC
miR168
:
1e-66
UniProt
no hits
RFAM
MIR168: 0.00000000004
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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