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ABOUT THIS RECORD

ID: MNEST001640
species: Nicotiana tabacum
miRNA family: MIR156
source: miRNEST

Taxonomy by NCBI:
Nicotiana tabacum Nicotiana Nicotianeae Nicotianoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGACAGAAGAGAGTGAGCACA

miRNA*
 TGCTCACTTCTCTTGCTGTCACC

mismatches: 0
bulges: 2
View larger
pre-miRNA
 TCAGATGTATGGTAATGTTTGTGGTTGGGAGAGAAGCAAATAAGAGAAGGGGGGACAAGGAGAATCAAGACTGACAGAAGAGAGTGAGCACACGCAGGCA
ATTGTATAAAGATGTATACACACTGTCATTTGCGTGTGCTCACTTCTCTTGCTGTCACCTCTCTCTATATACTTTCCCCCATTTTATTCGGTTTGCTTTG
CTTCCACCACTCAAACCACTTACACTT

dot-bracket secondary structure
.....((((((((..((...(((((.(((((.(((((((((..(((...((((((.(((.(((....(((.(((((((((((((((((((((((((((((
..((((((......))))))...))))...))))))))))))).)))))).))))))..))).))).....)))))))))......))).))))))))).
)))))))))).)).))))..))))...


SIMILARITIES
miRBase tcc-MIR156c: 8e-16

PMRD stu-miR156a: 6e-20

microPC miR156: 6e-20		UniProt no hits

RFAM mir-156: 0.0000000000009		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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